So many upgrades. So to consolidate the upgrades I will be doing:
Vernier isolates upgrade:
https://www.rgmnorton.co.uk/shop/search.htm?kw=vernier+isolastic&st=k&search.x=0&search.y=0
Later style kickstand and center stand
Possibly later style swing arm. Are there swing arm isolastic upgrades?
Kegler clamps to swing arm tubes
Single piece rear axle
Full flow oil filter
Aftermarket head steady. Any recommendations or is the one on Andover ok?
While the RGM vernier isolastics are less expensive, I don't use them because the rubber is too hard. I much prefer the AN version.
Lot of work, but the later center and side stands are a great idea. Be sure to make that choice with a bare frame and the correct cradle available.
If by later style swingarm you mean the MKIII version - not sure that's reasonable (or possible?) If you mean the pre-MKIII reinforced swingarm, that's good. There are (I think) four:
Original with through bolt.
Reinforced with though bolt
Reinforced without through bolt (may just be with MKIII type end caps, not sure)
MKIII
Whenever possible on pre-MKIII I used the reinforced swingarm with the through bolt.
The first three can have Kegler clamps. Not needed with the MKIII cradle/swingarm.
The swingarm and isolastics have nothing to do with each other.
The single piece rear axle is a nice upgrade especially if the current parts are ugly or need replacing.
The original flat head steady must be replaced. The boxed version is good enough for me. The boxed version with the springs is better still. Most think the after-market head steadies are an improvement. IMHO, for the riding most of us do that is nonsense (flamers, get over yourselves, it's MHO!

) If I were going to use an after-market head steady it would be the one from cNw as it used the mounting holes rather than a tube clamp.