I BELIEVE (but you would have to ask) that Megacycles recommendation "assumes" standard head, barrels, and pushrods.
Tell Barbara what all equipment you are running, and she'll get back to you with alternate settings if appropriate.
She did that for me when I told her I was using a VR880 cylinder with White Bros. pushrods & JE pistons on my bike that got a 560-00, I believe it was .010". Oh, yes, they radiused the lifters for me. I forget who she said she asked, and he gave her the setting for me to use.